BioXOmics
Are you struggling with the complexities of your omics experiment?
Do you require publication-quality outputs?
Look no further.
BioXOmics is here to assist you.
In the intricate world of omics research,
it's not just about generating data, it's about understanding its significance. While data generation is an essential step, many researchers find themselves daunted by the challenge of translating raw numbers and patterns into actionable insights. This is where we shine.
At BioXOmics, we recognize that the true power of omics lies in the interpretation of results. Our unique strength lies in our ability to transform complex omics data into clear, meaningful biological interpretations.
We don't stop at providing you with graphs and statistics; we go further to answer the crucial questions: What do these findings mean for your research? How can they shape your next steps? Our team of experienced bioinformaticians and biologists excels at bridging the gap between data and understanding.
We have a passion for uncovering the 'why' behind the 'what.' With our expertise, you can trust that your research will not only yield valuable results but also meaningful insight that drive your discoveries forward.
What We Offer
Experiment Design
We help you craft a robust experimental design tailored to your research objectives.
Biological Interpretations
Our expertise extends to providing insightful biological interpretations of your data.
Omics Specialization
We focus on transcriptomics, proteomics, and lipidomics. We also work with genomics databases, extracting essential preliminary data for your research.
Cutting-Edge Techniques
We are committed to delivering impeccable single-cell transcriptomics and are actively exploring the realm of 3D genomics.
Diverse Species
We work with a wide range of biological species with a mapped genome.
Thorough Data Analysis
We conduct comprehensive data analysis, ensuring that you gain meaningful insights from your experiments.
Our Workflow
Initial Consultation
We begin with an introductory meeting to understand your experiment's design and objectives.
Interim Progress
During the interim meeting, we present the initial analysis results. We engage in discussions about technical challenges, potential interpretations, and directions for further analysis.
Project Finalization
We conclude the project by providing you with clear and concise conclusions, explanations, and final graphs relevant to your area of interest. We also engage in in-depth discussions to address any specific details.
Deliverables
At BioXOmics, we are dedicated to helping you navigate the intricate world of omics research. With our expertise, you can confidently pursue your scientific endeavors, knowing that you have a trusted partner by your side.
High-Resolution Graphics
You'll receive finalized high-resolution graphs or schematics in your preferred format.
Graph-Pad Files
We provide graph-pad files for easy integration into your research documents.
Normalized Data
You'll receive normalized data in the form of counts or intensities, ensuring the reliability of your results.
Materials and Methods
We assist in crafting the Materials and Methods section for your publications, saving you valuable time and effort.
Our Work
Every research group requires a different kind of analysis or wishes to explore various aspects of the transcriptome or proteome. We are ready to accommodate any request, even the most unconventional color layouts, if it aids the biological interpretation. Here is a brief example of statistical analysis for a transcriptomics dataset obtained from the GEO database.
We employ PCA analysis to assess differences between samples, providing an estimation of the strength of phenotypic variations.
Upon request, we conduct a differential expression analysis between two treatments, identifying genes that are statistically significant and likely contributors to the induced phenotype.
For a visual representation, any differentially expressed genes or gene sets can be illustrated in a heatmap, offering insights into the individual differences between samples in the observed gene set.
Furthermore, gene ontologies of differentially expressed genes, both upregulated and downregulated, can be presented side-by-side or separately. If desired, the graph may include parent and child terms.
We enjoy experimenting with diverse means of data presentation. For instance, the gene ontologies of upregulated genes can be visualized in a bubble plot, showcasing their relationships.
Similarly, the gene ontologies of significantly downregulated genes demonstrate their relationships, distances, and pathway enrichments within the presented gene ontologies.
Contact Us
Send us new request
We are based in Prague, Czech Republic.
Feel free to reach out to us in English or Czech.